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Force field parameters from Lipidbook
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Parameter files in this zip file were downloaded from https://www.lipidbook.org.
Linked parameters need to be manually downloaded via the links in links.txt.

Always cite the primary reference(s) for the parameters, which can be
found at the end of this file.

Please cite Lipidbook in your published work with the reference

J. Domanski, P. Stansfeld, M.S.P. Sansom, and O. Beckstein.
Lipidbook: A Public Repository for Force Field Parameters Used in Membrane
Simulations. J. Membrane Biol. 236 (2010), 255--258. doi:10.1007/s00232-010-9296-8.


License: CC-Attribute-ShareAlike 3.0 (cc-by-sa-3.0  http://creativecommons.org/licenses/by-sa/3.0/) 
 NOTE: The licence REQUIRES that you cite the primary reference when
       you use and/or modify these files.  See the link under Licence for
       details.

Overview
========
Lipid:         1,2-(cis-cis-9,12-octadecadienoyl)-sn-glycero-3-phosphatidylcholine (DUPC)
Forcefield:    Martini
Code:          Gromacs
Version:       1 (created: 22-01-2011, last update: 22-01-2011)
Curator:       Jan Domanski
Lipidbook URL: https://www.lipidbook.org/version/show/id/63.html
File manifest
=============
Downloaded files are listed with SHA1 checksums. You can compute the
checksums of the downloaded files (e.g. with the 'openssl sha1' or
the 'sha1sum' commands) and compare them to the listed ones. If they
agree you have verified the files; it also allows a simple check of
which files changed between versions.
dupc.itp                  : 762b44335de380bc491dfff53a2cf784879efb6c
grompp.mdp                : 5ff0f762a24d4e72b371ebfdd8558c318e11c429
links.txt                 : adc83b19e793491b1c6ea0fd8b46cd9f32e592fc
raft-mixed.gro            : fce352ed3e0fcbe9bcbc22230133684ad3e1a11b
raft-separated.gro        : c24b15f42ce7084e9954a51e851db18a7108841c
topol.top                 : 46f5b5aa5ce63eca8c0fe0530d32c280c430c4f2
SHA1 of all files         : 9533419244dbf64f627dcf328fa477f1b8227b7a

Primary reference(s)
===================
Please always credit the original authors of the parameters by citing
these papers:

Title:     The MARTINI force field: coarse grained model for biomolecular simulations.
Authors:   Marrink SJ, Risselada HJ, Yefimov S, Tieleman DP, de Vries AH
Journal:   J Phys Chem B
Year:      2007
Volume:    111
Page:      7812-24
pubmed id: 17569554
doi:       10.1021/jp071097f

Additional notes: 
           -

Title:     Cholesterol shows preference for the interior of polyunsaturated lipid membranes.
Authors:   Marrink SJ, de Vries AH, Harroun TA, Katsaras J, Wassall SR
Journal:   J Am Chem Soc
Year:      2008
Volume:    130
Page:      10-1
pubmed id: 18076174
doi:       10.1021/ja076641c

Additional notes: 
           -

Title:     The molecular face of lipid rafts in model membranes.
Authors:   Risselada HJ, Marrink SJ
Journal:   Proc Natl Acad Sci U S A
Year:      2008
Volume:    105
Page:      17367-72
pubmed id: 18987307
doi:       10.1073/pnas.0807527105

Additional notes: 
           -

